<?xml version="1.0"?>
<!DOCTYPE rdf:RDF [
  <!ENTITY rdfs 'http://www.w3.org/2000/01/rdf-schema#'>
  <!ENTITY so 'http://purl.org/sswap/SO/'>
  <!ENTITY xsd 'http://www.w3.org/2001/XMLSchema#'>
  <!ENTITY owl 'http://www.w3.org/2002/07/owl#'>
  <!ENTITY rdf 'http://www.w3.org/1999/02/22-rdf-syntax-ns#'>
  <!ENTITY oboInOwl 'http://purl.org/sswap/oboInOwl/'>]>
<rdf:RDF
    xmlns:rdf="&rdf;"
    xmlns:owl="&owl;"
    xmlns:xsd="&xsd;"
    xmlns:oboInOwl="&oboInOwl;"
    xmlns:so="&so;"
    xmlns:rdfs="&rdfs;">
    <owl:Ontology rdf:about="&so;owlOntology">
        <owl:imports rdf:resource="&so;owlOntology"/>
    </owl:Ontology>
    <owl:Class rdf:about="&so;SO_1001268"/>
    <owl:Class rdf:about="&so;SO_1001274">
        <rdfs:subClassOf rdf:resource="&so;SO_1001268"/>
        <rdfs:label xml:lang="en">SECIS_element</rdfs:label>
        <oboInOwl:hasExactSynonym>
            <oboInOwl:Synonym>
                <rdfs:label xml:lang="en">SECIS element</rdfs:label>
            </oboInOwl:Synonym>
        </oboInOwl:hasExactSynonym>
        <oboInOwl:hasDefinition>
            <oboInOwl:Definition>
                <rdfs:label xml:lang="en">The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.</rdfs:label>
                <oboInOwl:hasDbXref>
                    <oboInOwl:DbXref>
                        <rdfs:label rdf:datatype="&xsd;string"
                        >URL:http://www.sanger.ac.uk/cgi-bin/Rfam/getacc?RF00031</rdfs:label>
                        <oboInOwl:hasURI rdf:datatype="&xsd;anyURI"
                        >http://www.sanger.ac.uk/cgi-bin/Rfam/getacc?RF00031</oboInOwl:hasURI>
                    </oboInOwl:DbXref>
                </oboInOwl:hasDbXref>
            </oboInOwl:Definition>
        </oboInOwl:hasDefinition>
        <oboInOwl:hasOBONamespace rdf:datatype="&xsd;string">sequence</oboInOwl:hasOBONamespace>
    </owl:Class>
</rdf:RDF>

