Top level classes for some of the major Open Biomedical Ontologies (OBO).
Allows easy and succinct specification for OBO data types for SSWAP (http://sswap.info) RDGs (Resource Description Graphs). For example, to specify that a SSWAP semantic web service accepts Gene Ontology (GO) terms as input, the sswap:Subject node simply asserts that it is of rdf:type obo:GO. Use is analogous for specifying return data types with sswap:Object.
See http://sswap.info for more information on SSWAP semantic web services.
Food
Food
Trait Ontology
Sequence feature
Sequence feature
Sequence collection
Sequence collection
Mutation
Mutation
Cellular component
Cellular component
Sequence attribute
Sequence attribute
Microarray and Gene Expression Data (MGED) Ontology
Plant structure
Plant structure
Molecular function
Molecular function
Sequence replication mode
Sequence replication mode
Sequence operation
Sequence operation
Plant growth and development stages
Plant growth and development stages
Sequence variant
Sequence variant
Plant Ontology
Environmental matter
Environmental matter
MGED Ontology
MGED Ontology
Genome
Genome
MGED Extended Ontology
MGED Extended Ontology
Biological process
Biological process
'Term' is a class that serves as the superclass of all OBO style "terms", including classes defined in concrete ontologies such as GO, PO, SO, TO, etc.. Each such class corresponds to the contents of a '[Term]' stanza in an OBO file, as described in the format guide http://www.geneontology.org/GO.format.obo-1_0.shtml. Note that the SSWAP-compliant OBO ontology (of which this class is a part) defines an AnnotationProperty corresponding to the major required and optional tags that can be contained within the '[Term]' stanza of the associated class.
Environmental Ontology
Trait Ontology
Trait Ontology
Environmental feature
Environmental feature
Gene Ontology
Sequence Ontology
Biome
Biome
MGED Core Ontology
MGED Core Ontology
Open Biomedical Ontologies
Chromosome variation
Chromosome variation
Standardized predicate for any "thing" to assert a relationship to something of type obo:PO.
Standardized predicate for any "thing" to assert a relationship to something of type obo:SO.
Standardized predicate for any "thing" to assert a relationship to something of type obo:ENVO.
Super property for all OBO object properties
Standardized predicate for any "thing" to assert a relationship to something of type obo:Term.
Standardized predicate for any "thing" to assert a relationship to something of type obo:OBO.
Standardized predicate for any "thing" to assert a relationship to something of type obo:TO.
Standardized predicate for any "thing" to assert a relationship to something of type obo:MO.
Standardized predicate for any "thing" to assert a relationship to something of type obo:GO.
A property of obo:Term and its subclasses that corresponds to the required 'name' tag within the [Term] stanza within an OBO format file.
Super class for all OBO datatype properties.
A property of obo:Term and its subclasses that corresponds to the optional 'comment' tag within the [Term] stanza within an OBO format file.
A property of obo:Term and its subclasses that corresponds to the optional 'def' (definition) tag within the [Term] stanza within an OBO format file.
A property of obo:Term and its subclasses that corresponds to the required 'id' tag within the [Term] stanza within an OBO format file.